SubtiBank SubtiBank
yndF [2017-8-11 16:0:3]
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yndF [2017-8-11 16:0:3]

part of the YndD-YndE-YndF germinant receptor of unknown specificity
locus
BSU17770
pI
7.26
mw
44.66 kDa
protein length
404 aa Sequence Blast
gene length
1212 bp Sequence Blast
function
germination
product
part of the YndD-YndE-YndF germinant receptor
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.5|Germination/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    1,910,167 → 1,911,381

    The protein

    Protein family

  • gerABKC lipoprotein family (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|AE28299B0F274B189DD90554A5A4F7B9A9479B60|yndD]-[gene|B14179D0EF5D3493E5CDB8E15378A5088B4FFD10|yndE]-[gene|2211659780DEC3F4131B127E68EEF626534DF4BE|yndF]
    description
    [Pubmed|16497325]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|15699190,16497325], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulation

  • expressed late during sporulation in the forespore ([protein|search|SigG]) [Pubmed|15699190,16497325]
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    Biological materials

    Mutant

  • MGNA-A024 (yndF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/24 NBRP B. subtilis, Japan]

    • References

  • 15699190,16497325,10762253